The first time I made pumpkin chocolate chip muffins, it wasn’t because I had a plan—it was because I had a half-empty can of pumpkin puree sitting in the fridge and I couldn’t stand to waste it. I had just baked a pumpkin pie for a family gathering, and I remember staring at that leftover puree, thinking, “What now?” Muffins seemed like the easiest solution, but what came out of the oven that evening changed how I looked at pumpkin forever.
The house filled with that warm, earthy scent of cinnamon and cloves, but the surprise was in the taste—moist, rich, and punctuated with melty chocolate chips. It was one of those rare baking moments where something thrown together became a new family favorite.
Now, every fall, these muffins make their way into my kitchen, not out of necessity but because they carry the comfort of that first accidental batch.

Why You’ll Love This Recipe
- Simple ingredients you probably already have in your pantry
- Moist, tender crumb with just the right amount of sweetness
- Cozy pumpkin spice flavor balanced with rich chocolate
- Freezer-friendly and perfect for make-ahead breakfasts
- Kid-approved and lunchbox-friendly
Ingredients You’ll Need
- 1 ¾ cups all-purpose flour – I’ve tried this with half whole wheat flour and it works beautifully if you want a heartier muffin.
- 1 teaspoon baking soda – essential for lift; don’t skip it.
- 2 teaspoons pumpkin pie spice – or make your own with cinnamon, nutmeg, ginger, and cloves. Sometimes I lean heavier on cinnamon if I’m low on the others.
- ½ teaspoon salt – just enough to balance the sweetness.
- 1 cup canned pumpkin puree – make sure it’s puree, not pumpkin pie filling. I once made that mistake and ended up with muffins that tasted oddly perfumed.
- ½ cup granulated sugar – I’ve swapped part of this with coconut sugar and it worked fine, though the flavor deepens a bit.
- ½ cup brown sugar – light or dark, both add that caramel-like warmth.
- ½ cup vegetable oil – melted butter works too, though the muffins are slightly denser.
- 2 large eggs – room temperature makes them blend more smoothly.
- 1 teaspoon vanilla extract – because no muffin should be without it.
- 1 cup semi-sweet chocolate chips – I sometimes use dark chocolate chips if I want them less sweet.
How to Make It
Start by preheating your oven to 350°F (175°C). I always like to do this first, because there’s nothing worse than having your batter ready and realizing the oven is still cold. Line a standard 12-cup muffin pan with paper liners or lightly grease the cups. I usually keep parchment liners on hand since muffins can stick if the batter is especially moist.
In a medium bowl, whisk together the flour, baking soda, pumpkin pie spice, and salt. This step matters more than it looks—whisking aerates the flour and ensures the leavening agents are evenly distributed. I once rushed through and dumped everything straight into the wet mix, and the result was muffins that rose unevenly and had dense patches.
In a larger bowl, combine the pumpkin puree, granulated sugar, brown sugar, oil, eggs, and vanilla. Stir until smooth and glossy. The pumpkin not only brings flavor but also acts as a natural tenderizer, so don’t be surprised if the batter looks silkier than other muffin batters.
Gradually fold the dry ingredients into the wet mixture. I like to switch to a spatula here instead of a whisk—it keeps me from overmixing, which is the easiest way to end up with tough muffins. The batter should look just combined, with no streaks of flour left, but don’t panic if it seems thicker than you expect. That’s how it should be.
Gently stir in the chocolate chips, leaving a few aside if you want to sprinkle some on top for a bakery-style finish. Scoop the batter evenly into the muffin cups, filling each about three-quarters full. I’ve found that an ice cream scoop works perfectly here and keeps the muffins uniform in size.
Bake for 18–22 minutes, until a toothpick inserted in the center comes out clean (or with just a smudge of melted chocolate). Resist the urge to open the oven too early—these muffins need steady heat to rise properly. Let them cool in the pan for 5 minutes before transferring to a wire rack. That brief rest helps the structure set, but leaving them too long in the pan can create a soggy bottom.

Expert Tips for the Best Results
Over the years, I’ve learned that pumpkin muffins can go from light and tender to dense and gummy with just one misstep, and most of the time, it comes down to mixing. The secret is to stir gently and stop as soon as the flour disappears into the batter. Another tip: if your spices feel dull or have been sitting in the pantry too long, the flavor won’t pop the same way. I always give mine a quick sniff—if the aroma isn’t strong, it’s worth replacing before baking. And don’t skimp on the chocolate chips; they not only add sweetness but also balance the earthiness of pumpkin in a way that sugar alone never could.
Variations & Substitutions
I can’t count how many times I’ve baked these muffins with a missing ingredient, and honestly, some of those batches turned out just as good as the original. One autumn afternoon, I realized I was out of chocolate chips, so I chopped up a bar of dark chocolate instead. The uneven chunks gave the muffins little pockets of molten chocolate, and now I sometimes do it on purpose. If you prefer nuts, toasted pecans or walnuts add a lovely crunch. I’ve even swapped the pumpkin puree with mashed sweet potato once, and the result was so close my family didn’t notice until I told them.
Serving Suggestions
These muffins shine brightest on chilly mornings with a hot cup of coffee or tea, but they’re just as welcome at an afternoon gathering or tucked into a lunchbox. I’ve served them warm with a smear of butter when friends stopped by unexpectedly, and I’ve set them out on the Thanksgiving breakfast table as something light before the big meal. They’re humble enough for everyday snacking but comforting enough to feel like a little treat.
Storage & Reheating Instructions
In my kitchen, these muffins rarely last beyond a day or two, but when they do, I store them in an airtight container at room temperature for up to three days. If I know we won’t get through them that quickly, I freeze half the batch and pull them out as needed. A quick 20 seconds in the microwave brings them back to life, and while the tops lose a bit of their original crispness, the centers stay soft and moist.
Recipe FAQs
Can I make these ahead of time?
You sure can. I often bake them the night before and keep them covered on the counter. They taste even better the next morning.
Can I use fresh pumpkin instead of canned?
Yes, but make sure it’s well-cooked and pureed smoothly. Fresh pumpkin can be a little more watery, so drain any excess liquid before using.
What kind of chocolate works best?
I usually go with semi-sweet chips, but dark chocolate is my personal favorite. Milk chocolate makes them sweeter, so it depends on your taste.
Can I make them gluten-free?
I’ve had success with a good 1:1 gluten-free baking blend. The texture is a bit more delicate, but they’re still delicious.

Conclusion
Every time I pull a tray of pumpkin chocolate chip muffins out of the oven, I’m reminded of that first impromptu batch and the joy of discovering something wonderful by accident. These muffins have since become a tradition, a small comfort in my kitchen that I love sharing with others. If you try them, I’d love to hear how they turn out for you—whether you follow the recipe to the letter or make it your own with little twists along the way. Bake a batch, share them with someone you love, and let these muffins bring a bit of warmth to your day.
Nutrition Information (per muffin, approximate)
Calories: 250
Fat: 12g
Carbohydrates: 33g
Protein: 3g
Sugar: 20g

Pumpkin Chocolate Chip Muffins
Ingredients
- These Pumpkin Chocolate Chip Muffins are moist fluffy, and packed with cozy fall spices. Sweet pumpkin puree pairs perfectly with melty chocolate chips, making them a delicious breakfast, snack, or dessert. Perfect for autumn mornings, holiday brunches, or anytime you crave a seasonal treat.
Instructions
- Preheat oven: Preheat oven to 350°F (175°C). Line a 12-cup muffin tin with paper liners or grease lightly.
- Mix dry ingredients: In a medium bowl, whisk together flour, baking soda, baking powder, salt, cinnamon, nutmeg, ginger, and pumpkin pie spice.
- Mix wet ingredients: In a large bowl, whisk eggs, pumpkin puree, oil, both sugars, and vanilla until smooth.
- Combine: Gently fold the dry ingredients into the wet mixture until just combined. Do not overmix.
- Add chocolate chips: Fold in chocolate chips.
- Fill muffin tins: Divide batter evenly among the 12 muffin cups. Sprinkle extra chocolate chips on top if desired.
- Bake: Bake for 18–22 minutes, or until a toothpick inserted in the center comes out clean.
- Cool & serve: Let muffins cool in the pan for 5 minutes, then transfer to a wire rack.
Notes
- For extra moist muffins, replace half the oil with unsweetened applesauce.
- Store muffins at room temperature in an airtight container for up to 3 days, or refrigerate for up to 1 week.
- Freeze baked muffins for up to 2 months.
- Add chopped pecans, walnuts, or pumpkin seeds for a crunchy topping.